Information for motif15


Reverse Opposite:

p-value:1e-3
log p-value:-8.824e+00
Information Content per bp:1.625
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif40.91%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif10.11%
Average Position of motif in Targets333.4 +/- 169.4bp
Average Position of motif in Background660.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-WTCWGACM-
KTTCACACCT

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----WTCWGACM-----
NNTTTTCACACCTTNNN

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----WTCWGACM-----
CAAATCCAGACATCACA

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:WTCWGACM--
ATCACCCCAT

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:WTCWGACM-
-CCAGACAG

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-WTCWGACM-
ATTAACACCT

MA0009.1_T/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:WTCWGACM---
TTCACACCTAG

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--WTCWGACM--
CNGTCACGCCAC

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WTCWGACM-
-TGACACCT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:WTCWGACM-
---TGACCT