Information for motif17


Reverse Opposite:

p-value:1e-3
log p-value:-7.960e+00
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif54.55%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif26.90%
Average Position of motif in Targets247.9 +/- 267.8bp
Average Position of motif in Background272.3 +/- 105.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGCTAACG-
-GCTGACGC

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGCTAACG-----
GCGGCGATATCGCAGCG

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAACG-----
CNNNGCTACTGTANNN

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAACG-----
TNNTGCTACTGTNNNN

PB0109.1_Bbx_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTAACG----
NNNNCTGTTAACNNTNN

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CGCTAACG--
CCTTCGGCGCCAAAAGG

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCTAACG
NGCTN---

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCTAACG
AGGTCTCTAACC

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCTAACG----
--NHAACBGYYV

PH0167.1_Tcf1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGCTAACG-----
CCTTAGTTAACTAAAAT