Information for motif21


Reverse Opposite:

p-value:1e-2
log p-value:-6.444e+00
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif19.16%
Average Position of motif in Targets272.9 +/- 309.9bp
Average Position of motif in Background493.0 +/- 134.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ACACAGGA---
-AACAGGAAGT

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ACACAGGA
-CACAGN-

MA0098.2_Ets1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGGA------
NNNACAGGAAGTGGN

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ACACAGGA---
-NACAGGAAAT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ACACAGGA----
--ACAGGAAGTG

MA0143.3_Sox2/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGGA
AACAAAGG-

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------ACACAGGA--
AAACAGACAAAGGAAT

MA0474.1_Erg/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACACAGGA-----
--ACAGGAAGTGG

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACACAGGA---
-NACAGGAAAT

MA0442.1_SOX10/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACACAGGA
ACAAAG--