Information for motif23


Reverse Opposite:

p-value:1e-2
log p-value:-5.093e+00
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif25.67%
Average Position of motif in Targets278.9 +/- 259.0bp
Average Position of motif in Background455.9 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGGG
NAHCAGCTGD-

MA0522.1_Tcf3/Jaspar

Match Rank:2
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGGG
NTGCAGCTGTG

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGGG
CAGCAGCTGN-

MA0500.1_Myog/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGG-
GACAGCTGCAG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGGG-
GCAGCTGTNN

MA0048.1_NHLH1/Jaspar

Match Rank:6
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGGG-
GCGCAGCTGCGT

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGG
AACAGCTG--

MA0521.1_Tcf12/Jaspar

Match Rank:8
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGG-
AACAGCTGCAG

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGGG-
ACAGCTGTTN

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGG
ANCAGCTG--