Information for motif24


Reverse Opposite:

p-value:1e-1
log p-value:-4.266e+00
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif54.55%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif32.49%
Average Position of motif in Targets350.0 +/- 321.1bp
Average Position of motif in Background428.8 +/- 293.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGGCCTGGGT
AGGCCTAG--

MA0524.1_TFAP2C/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGGCCTGGGT-----
TGCCCTGGGGCNANN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGGCCTGGGT
AGGCCTNG--

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTGGGT
CTGACCTTTG-

MA0592.1_ESRRA/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCTGGGT
NGTGACCTTGG-

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGCCTGGGT
TGACCTTGAN

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGCCTGGGT
TGACCTTGAV

MA0146.2_Zfx/Jaspar

Match Rank:8
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------TGGCCTGGGT
GGGGCCGAGGCCTG---

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGCCTGGGT-
ATGCCCTGAGGC

MA0003.2_TFAP2A/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGCCTGGGT-----
TGCCCTGAGGCANTN