Information for motif3


Reverse Opposite:

p-value:1e-7
log p-value:-1.769e+01
Information Content per bp:1.458
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif59.09%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif17.86%
Average Position of motif in Targets214.2 +/- 154.8bp
Average Position of motif in Background590.4 +/- 287.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCATATATTT---
TGTATATATATACC

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCATATATTT
GCAGTGATTT

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCATATATTT
AAGATATCCTT

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCATATATTT-----
---KCTATTTTTRGH

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCATATATTT
TGCTGTGATTT

MA0497.1_MEF2C/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCATATATTT-------
--TTCTATTTTTAGNNN

MA0042.1_FOXI1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCATATATTT----
--GGATGTTTGTTT

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCATATATTT-------
GNATTTTTTTTTTGANC

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCATATATTT-
CCTTGCAATTTTTNN

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCATATATTT----
-----TGTTTATTT