Information for motif6


Reverse Opposite:

p-value:1e-6
log p-value:-1.578e+01
Information Content per bp:1.463
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif72.73%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif26.90%
Average Position of motif in Targets227.5 +/- 184.4bp
Average Position of motif in Background397.8 +/- 290.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAACAGCATT
-CACAGN---

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAACAGCATT-
CAAACAACAACACCT

MA0480.1_Foxo1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAACAGCATT
TGTAAACAGGA--

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAACAGCATT---
AATCGCACTGCATTCCG

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAACAGCATT
---CAGCC--

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAACAGCATT--
TCNNTTTACAGCGNNNT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAACAGCATT---
HWWGTCAGCAWWTTT

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAACAGCATT--
TCNCTTTACAGCGNNNT

MA0496.1_MAFK/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAACAGCATT--
CTGAGTCAGCAATTT

MA0133.1_BRCA1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAACAGCATT
ACAACAC----