Information for motif7


Reverse Opposite:

p-value:1e-6
log p-value:-1.522e+01
Information Content per bp:1.625
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif54.55%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif16.69%
Average Position of motif in Targets241.1 +/- 204.9bp
Average Position of motif in Background647.9 +/- 345.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0114.2_HNF4A/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTASACTTT------
-CTGGACTTTGGACTC

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCTASACTTT----
NNATTGGACTTTNGNN

MA0484.1_HNF4G/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTASACTTT-------
--TGGACTTTGNNCTCN

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTASACTTT--------
--TGGACTTTGNNCTNTG

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTASACTTT-
AGTTTCAGTTTC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTASACTTT-
ACTTTCACTTTC

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTASACTTT----
--TGACCTTTNCNT

MA0051.1_IRF2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCTASACTTT--
GTTTTGCTTTCACTTTCC

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTASACTTT-
RSTTTCRSTTTC

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTASACTTT----
CCTTGCAATTTTTNN