Information for motif8


Reverse Opposite:

p-value:1e-6
log p-value:-1.522e+01
Information Content per bp:1.647
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif54.55%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif8.94%
Average Position of motif in Targets279.7 +/- 263.1bp
Average Position of motif in Background449.0 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0508.1_PRDM1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCTCTCT
TCACTTTCACTTTCN

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTCT
ACTTTCACTTTC-

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTCT
ACTTTCACTTTC-

MA0050.2_IRF1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CTCTCTCTCTCT----
TTTTACTTTCACTTTCACTTT

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTCT
AGTTTCAGTTTC-

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCTCTCTCTCT---
ACCACTCTCGGTCAC

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTCT
RSTTTCRSTTTC-

MA0051.1_IRF2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------CTCTCTCTCTCT
GTTTTGCTTTCACTTTCC

MA0080.3_Spi1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCTCTCT
NCACTTCCTCTTTTN

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTCTCTCT
ANTCCTTTGTCTNNNN