Information for motif11


Reverse Opposite:

p-value:1e-35
log p-value:-8.120e+01
Information Content per bp:1.373
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets394.9 +/- 330.5bp
Average Position of motif in Background395.3 +/- 154.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---NNNTCKTTTGHD--
AAAACATCGTTTTTAAG

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:NNNTCKTTTGHD--
----CCTTTGAWGT

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:NNNTCKTTTGHD-----
NNTTCCTTTGATCTNNA

MA0143.3_Sox2/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:NNNTCKTTTGHD
----CCTTTGTT

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:NNNTCKTTTGHD
-TGTCGGTT---

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:NNNTCKTTTGHD----
GGGCCGTGTGCAAAAA

MA0109.1_Hltf/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:NNNTCKTTTGHD
-AACCTTATAT-

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:NNNTCKTTTGHD-----
NNTTCCTTTGATCTANA

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:NNNTCKTTTGHD
----CCWTTGTY

MA0514.1_Sox3/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:NNNTCKTTTGHD--
----CCTTTGTTTT