Information for motif12


Reverse Opposite:

p-value:1e-34
log p-value:-7.989e+01
Information Content per bp:1.837
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets446.1 +/- 323.6bp
Average Position of motif in Background292.3 +/- 302.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCGAGTCC-
-CTAGGCCT

MA0146.2_Zfx/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCGAGTCC--
GGGGCCGAGGCCTG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCGAGTCC-
-CNAGGCCT

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCGAGTCC--
CAAAGGCGTGGCCAG

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCGAGTCC----
NTNNNAGGAGTCTCNTN

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCGAGTCC
GGGGGCGGGGCC

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GCGAGTCC
NNGCNCTGCGCGGC-

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCGAGTCC----
ANCGCGCGCCCTTNN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGAGTCC
TGCGTG---

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCGAGTCC----
NTCGCGCGCCTTNNN