p-value: | 1e-28 |
log p-value: | -6.468e+01 |
Information Content per bp: | 1.716 |
Number of Target Sequences with motif | 36.0 |
Percentage of Target Sequences with motif | 1.44% |
Number of Background Sequences with motif | 1.1 |
Percentage of Background Sequences with motif | 0.11% |
Average Position of motif in Targets | 414.6 +/- 359.2bp |
Average Position of motif in Background | 560.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PB0192.1_Tcfap2e_2/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGAAAAAAATGG TACTGGAAAAAAAA-- |
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MA0515.1_Sox6/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGAAAAAAATGG --AAAACAATGG |
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PB0182.1_Srf_2/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGAAAAAAATGG-- GTTAAAAAAAAAAATTA |
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MA0095.2_YY1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGAAAAAAATGG---- ----CAAGATGGCGGC |
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MA0152.1_NFATC2/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGAAAAAAATGG TGGAAAA------ |
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PB0186.1_Tcf3_2/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGAAAAAAATGG AGCCGAAAAAAAAAT- |
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MA0077.1_SOX9/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GGAAAAAAATGG ---GAACAATGG |
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PB0146.1_Mafk_2/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGAAAAAAATGG---- -GAAAAAATTGCAAGG |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GGAAAAAAATGG- ---GAACAATGGN |
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MA0143.3_Sox2/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGAAAAAAATGG ----AACAAAGG |
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