Information for motif2


Reverse Opposite:

p-value:1e-48
log p-value:-1.117e+02
Information Content per bp:1.715
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets398.9 +/- 358.4bp
Average Position of motif in Background122.6 +/- 108.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACATGGAGGAAA-
---NACAGGAAAT

MA0474.1_Erg/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACATGGAGGAAA---
----ACAGGAAGTGG

MA0081.1_SPIB/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACATGGAGGAAA
----AGAGGAA-

MA0152.1_NFATC2/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ACATGGAGGAAA-
------TGGAAAA

MA0136.1_ELF5/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ACATGGAGGAAA--
-----AAGGAAGTA

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ACATGGAGGAAA
AATATACATGTAAAATT

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ACATGGAGGAAA
TAAATACATGTAAAATT

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACATGGAGGAAA-
---AVCAGGAAGT

MA0598.1_EHF/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ACATGGAGGAAA-
-----CAGGAAGG

MA0156.1_FEV/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ACATGGAGGAAA-
-----CAGGAAAT