p-value: | 1e-26 |
log p-value: | -6.106e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 45.0 |
Percentage of Target Sequences with motif | 1.80% |
Number of Background Sequences with motif | 2.8 |
Percentage of Background Sequences with motif | 0.29% |
Average Position of motif in Targets | 379.6 +/- 315.9bp |
Average Position of motif in Background | 339.5 +/- 296.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PH0065.1_Hoxc10/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGCTTTACG------ ANNTTTTACGACNTNN |
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PH0077.1_Hoxd12/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGGCTTTACG------ NNNATTTTACGACNNTN |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGCTTTACG------ NNGTTTTACGACTTTA |
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PH0067.1_Hoxc12/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGGCTTTACG------ GNNNTTTTACGACCTNA |
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PH0066.1_Hoxc11/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGCTTTACG------ NNNTTTTACGACNTTN |
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PH0076.1_Hoxd11/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGGCTTTACG------ ANNATTTTACGACNTNA |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGCTTTACG------ ANATTTTACGAGNNNN |
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MA0164.1_Nr2e3/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGCTTTACG CAAGCTT---- |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGGCTTTACG CNAGGCCT---- |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGCTTTACG------ NAATTTTACGAGNTNN |
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