Information for motif23


Reverse Opposite:

p-value:1e-26
log p-value:-6.034e+01
Information Content per bp:1.951
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets419.8 +/- 427.1bp
Average Position of motif in Background579.8 +/- 298.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCAGTACC
GGTAAGTA--

MA0124.1_NKX3-1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCAGTACC
TAAGTAT-

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCAGTACC----
ATTTACAGTAGCAAAA

POL002.1_INR/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCAGTACC
TCAGTCTT

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCAGTACC----
ATGTACAGTAGCAAAG

PH0117.1_Nkx3-1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCAGTACC-----
NATTTAAGTACTTANNA

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCAGTACC
YCATTAMC

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTACC-
TTAAGTGCTT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCAGTACC-
GTTTCACTTCCG

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCAGTACC
TGAGTCAGCA--