Information for motif25


Reverse Opposite:

p-value:1e-25
log p-value:-5.788e+01
Information Content per bp:1.726
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets383.9 +/- 313.8bp
Average Position of motif in Background327.2 +/- 220.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGGTCCCT
-GCTCCG-

MA0056.1_MZF1_1-4/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGGTCCCT-
---TCCCCA

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGTCCCT----
AGGTCTCTAACC

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGTCCCT
AGGTCA--

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGTCCCT---
-GGTCCCGCCC

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGGTCCCT----
GGTCCCGCCCCCTTCTC

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGGTCCCT-----
NNGCACCTTTCTCC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGTCCCT--
CTGTTCCTGG

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGGTCCCT-----
-NGTCCCNNGGGA

MA0071.1_RORA_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGGTCCCT
ATCAAGGTCA--