Information for motif28


Reverse Opposite:

p-value:1e-24
log p-value:-5.669e+01
Information Content per bp:1.706
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets428.7 +/- 339.4bp
Average Position of motif in Background274.3 +/- 343.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0018.1_Foxk1_1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTTACATT--
NNNTTTGTTTACATTTN

PB0019.1_Foxl1_1/Jaspar

Match Rank:2
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTTACATT--
NNNTTTGTTTACATTTN

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTTACATT--
NNNTTTGTTTACTTTTN

MA0481.1_FOXP1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTTTACATT--
CTTTGTTTACTTTTN

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTTACATT--
NNNTTTGTTTACNTTNN

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTAGTTTACATT
NNNNTTTGTTTACNNT

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTAGTTTACATT---
TNAGTTTCGATTTTN

MA0593.1_FOXP2/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTAGTTTACATT
TNTGTTTACTT-

MA0148.3_FOXA1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTAGTTTACATT-
TCCATGTTTACTTTG

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTAGTTTACATT
--TGTTTACTTT