Information for motif3


Reverse Opposite:

p-value:1e-46
log p-value:-1.077e+02
Information Content per bp:1.759
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets359.2 +/- 308.1bp
Average Position of motif in Background618.4 +/- 365.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATTCAGAAAAAC-
AAATAAGAAAAAAC

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATTCAGAAAAAC-----
GTTAAAAAAAAAAATTA

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATTCAGAAAAAC
AATATTAATAAAGA-

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ATTCAGAAAAAC
GACCACATTCATACAAT-

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATTCAGAAAAAC--
NTTNAGAACAATTA

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTCAGAAAAAC
ACATTCATGACACG

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATTCAGAAAAAC-
TACTGGAAAAAAAA

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATTCAGAAAAAC--
AGAGCCATAAAATTCG

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATTCAGAAAAAC--
CTACCAATAAAATTCT

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATTCAGAAAAAC-----
GTTCAAAAAAAAAATTC