Information for motif31


Reverse Opposite:

p-value:1e-23
log p-value:-5.440e+01
Information Content per bp:1.940
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets375.9 +/- 291.0bp
Average Position of motif in Background574.0 +/- 501.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR/Cell-Cycle-Exp/Homer

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTCAAARAACAG
CGGTTTCAAA------

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTCAAARAACAG---
AACAAACAACAAGAG

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTCAAARAACAG
ATTTCCAAGAA---

PB0005.1_Bbx_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCAAARAACAG
TAATTCAATGAAGTG

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTCAAARAACAG
NTTTCTNAGAAA--

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTCAAARAACAG
ACATCAAAGG----

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTCAAARAACAG----
GTTCAAAAAAAAAATTC

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TTCAAARAACAG
TATAGATCAAAGGAAAA

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTCAAARAACAG
TATAGATCAAAGGAAAA

MA0114.2_HNF4A/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAARAACAG
NAGNNCAAAGTCCAN