Information for motif34


Reverse Opposite:

p-value:1e-22
log p-value:-5.200e+01
Information Content per bp:1.961
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets490.0 +/- 360.8bp
Average Position of motif in Background540.7 +/- 191.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0078.1_Sox17/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCAATGC-
GACAATGNN

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCAATGC-
AGATGCAATCCC

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCAATGC------
AATCGCACTGCATTCCG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCAATGC
CCWGGAATGY

MA0515.1_Sox6/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCAATGC
AAAACAATGG

MA0107.1_RELA/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCAATGC--
GGAAATTCCC

MA0105.3_NFKB1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCAATGC--
GGGAAATTCCC

MA0597.1_THAP1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCAATGC
TNNGGGCAG---

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCAATGC
NCTGGAATGC

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCAATGC
CTTGGCAA---