Information for motif35


Reverse Opposite:

p-value:1e-22
log p-value:-5.094e+01
Information Content per bp:1.691
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets419.2 +/- 349.7bp
Average Position of motif in Background471.0 +/- 75.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CAGGTGGCCT
CAGATGGC--

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGCCT
AACAGATGGC--

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGCCT
NNCAGGTGNN--

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTGGCCT--
AAGGCCAGATGGTCCGG

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGCCT
AACAKATGGY--

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGGCCT----
NNANTGGTGGTCTTNNN

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAGGTGGCCT
VNAVCAGCTGGC--

MA0104.3_Mycn/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAGGTGGCCT
CACGTGGC--

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CAGGTGGCCT
GAAGAACAGGTGTCCG

MA0522.1_Tcf3/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGGCCT
NTGCAGCTGTG--