Information for motif39


Reverse Opposite:

p-value:1e-20
log p-value:-4.813e+01
Information Content per bp:1.947
Number of Target Sequences with motif123.0
Percentage of Target Sequences with motif4.93%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif1.92%
Average Position of motif in Targets403.3 +/- 308.3bp
Average Position of motif in Background380.2 +/- 280.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GAACAGCC
YAACBGCC

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAACAGCC-----
AGCAACAGCCGCACC

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GAACAGCC-
NHAACBGYYV

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GAACAGCC
-CACAGN-

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GAACAGCC-
CCAACTGCCA

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GAACAGCC
---CAGCC

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GAACAGCC----
CGACCAACTGCCATGC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GAACAGCC
CCAGGAACAG--

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAACAGCC-
-AACAGCTG

MA0100.2_Myb/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAACAGCC-
CCAACTGCCA