Information for motif4


Reverse Opposite:

p-value:1e-45
log p-value:-1.046e+02
Information Content per bp:1.705
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets424.2 +/- 326.8bp
Average Position of motif in Background761.9 +/- 542.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GATACGCACA-
-ATATGCAAAT

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GATACGCACA-------
-CGAAGCACACAAAATA

MA0002.2_RUNX1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GATACGCACA---
--AAACCACAGAN

MA0507.1_POU2F2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATACGCACA----
-ATATGCAAATNNN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATACGCACA---
-NWAACCACADNN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GATACGCACA--
--AAACCACAGC

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GATACGCACA--
--AAACCACANN

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATACGCACA-------
-AGCGGCACACACGCAA

MA0058.2_MAX/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GATACGCACA---
---AAGCACATGG

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GATACGCACA-
-TTATGCAAAT