Information for motif40


Reverse Opposite:

p-value:1e-20
log p-value:-4.707e+01
Information Content per bp:1.885
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets374.7 +/- 281.5bp
Average Position of motif in Background213.7 +/- 249.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAAAGTTTGCAA---
ANATTTTTGCAANTN

CHR/Cell-Cycle-Exp/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AAAAGTTTGCAA---
-----TTTGAAACCG

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTTTGCAA--
GAAAAAATTGCAAGG

MA0102.3_CEBPA/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAAAGTTTGCAA-
--NATTGTGCAAT

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AAAAGTTTGCAA-
NTNATGCAAYMNNHTGMAAY

MA0466.1_CEBPB/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAAAGTTTGCAA--
---ATTGTGCAATA

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAAGTTTGCAA
--NATGTTGCAA

MA0164.1_Nr2e3/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAAAGTTTGCAA
--AAGCTTG---

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAAGTTTGCAA--
CTAATATTGCTAAA

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAAAGTTTGCAA---
GAAAAGGTGTGAAAATT