Information for motif42


Reverse Opposite:

p-value:1e-18
log p-value:-4.217e+01
Information Content per bp:1.801
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets413.0 +/- 256.7bp
Average Position of motif in Background87.1 +/- 81.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----YCATCTCAKCTC-
NNNTCCATCCCATAANN

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:YCATCTCAKCTC-
-SCTGTCARCACC

MA0037.2_GATA3/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YCATCTCAKCTC
---TCTTATCT-

MA0029.1_Mecom/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--YCATCTCAKCTC
TNTTATCTTATCTT

MA0482.1_Gata4/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:YCATCTCAKCTC--
---TCTTATCTCCC

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YCATCTCAKCTC
AAATCACTGC--

MA0596.1_SREBF2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-YCATCTCAKCTC
ATCACCCCAT---

MA0483.1_Gfi1b/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YCATCTCAKCTC
AAATCACAGCA-

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---YCATCTCAKCTC-----
NDBAGATRWTATCTVNNNNN

MA0035.3_Gata1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YCATCTCAKCTC-
--TTCTTATCTGT