Information for motif43


Reverse Opposite:

p-value:1e-18
log p-value:-4.170e+01
Information Content per bp:1.530
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets387.5 +/- 391.8bp
Average Position of motif in Background465.5 +/- 330.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGATACTGCC--
CTGATCGAAACCAAAGT

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGATACTGCC--
AGATGCTRCTRCCHT

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CGATACTGCC
ATAAACCGAAACCAA-

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGATACTGCC-
---TACTNNNN

PB0127.1_Gata6_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGATACTGCC---
GCGGCGATATCGCAGCG

MA0597.1_THAP1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGATACTGCC----
-----CTGCCCGCA

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGATACTGCC
CGTATCGAAACCAAA

MA0100.2_Myb/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGATACTGCC-
-CCAACTGCCA

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGATACTGCC----
CGACCAACTGCCATGC

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CGATACTGCC
NNATNTGATANNNNN