Information for motif44


Reverse Opposite:

p-value:1e-18
log p-value:-4.170e+01
Information Content per bp:1.530
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets375.4 +/- 305.7bp
Average Position of motif in Background307.1 +/- 114.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATGTCCCTCG
CTGTTCCTGG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGTCCCTCG
NYTTCCCGCC

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATGTCCCTCG
AAGATATCCTT--

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGTCCCTCG-
NCTGTCAATCAN

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATGTCCCTCG---
-NGTCCCNNGGGA

MA0471.1_E2F6/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGTCCCTCG-
NCTTCCCGCCC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGTCCCTCG
DTTTCCCGCC

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGTCCCTCG
-TGACCT---

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATGTCCCTCG-
VDTTTCCCGCCA

MA0154.2_EBF1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ATGTCCCTCG----
---TCCCTGGGGAN