Information for motif45


Reverse Opposite:

p-value:1e-16
log p-value:-3.824e+01
Information Content per bp:1.530
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets403.7 +/- 258.5bp
Average Position of motif in Background634.6 +/- 315.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0040.1_Foxq1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTTTATAAAGTA
TATTGTTTATT-----

PB0080.1_Tbp_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATAAAGTA-
NANTTATATATAANGN

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GTTTATAAAGTA
NNNNNNCTTTTATAN----

MA0108.2_TBP/Jaspar

Match Rank:4
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GTTTATAAAGTA
NNNNNNCTTTTATAN----

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATAAAGTA
TGTTTACA-----

PH0143.1_Pou2f1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTTTATAAAGTA
ATATATTAATTAAGTA

PH0173.1_Uncx/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATAAAGTA--
CNCNTTAATTAATTANN

PH0146.1_Pou3f1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATAAAGTA---
NANTTAATTAATTANNN

PH0012.1_Cdx1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTTTATAAAGTA-
TAAGGTAATAAAATTA

PB0174.1_Sox30_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATAAAGTA-
NCGTATTATAATCNTA