Information for motif49


Reverse Opposite:

p-value:1e-13
log p-value:-3.032e+01
Information Content per bp:1.530
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets410.7 +/- 299.6bp
Average Position of motif in Background437.7 +/- 222.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCTATTTCC
ACTTTCACTTTC-

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CTTTCTATTTCC
TCAGTTTCATTTTCC

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTTTCTATTTCC
AGTTTCAGTTTC-

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCTATTTCC
RSTTTCRSTTTC-

MA0051.1_IRF2/Jaspar

Match Rank:5
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------CTTTCTATTTCC
GTTTTGCTTTCACTTTCC

MA0050.2_IRF1/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CTTTCTATTTCC----
TTTTACTTTCACTTTCACTTT

MA0508.1_PRDM1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCTATTTCC
TCACTTTCACTTTCN

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTTTCTATTTCC
ACTTTCACTTTC-

MA0136.1_ELF5/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CTTTCTATTTCC--
-----TACTTCCTT

PB0115.1_Ehf_2/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTTTCTATTTCC------
--TAGTATTTCCGATCTT