Information for motif50


Reverse Opposite:

p-value:1e-12
log p-value:-2.901e+01
Information Content per bp:1.831
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets340.7 +/- 189.4bp
Average Position of motif in Background732.8 +/- 379.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0097.1_Zfp281_1/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-YCCCCCCCCCCC--
TCCCCCCCCCCCCCC

PB0100.1_Zfp740_1/Jaspar

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:YCCCCCCCCCCC----
CCCCCCCCCCCACTTG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:YCCCCCCCCCCC
--CCCCCCCC--

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.84
Offset:1
Orientation:forward strand
Alignment:YCCCCCCCCCCC
-GCCCCGCCCCC

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.79
Offset:1
Orientation:forward strand
Alignment:YCCCCCCCCCCC
-GCCCCGCCCC-

MA0162.2_EGR1/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:forward strand
Alignment:YCCCCCCCCCCC---
-CCCCCGCCCCCGCC

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:YCCCCCCCCCCC----
-GCCCCGCCCCCTCCC

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-YCCCCCCCCCCC----
TCACCCCGCCCCAAATT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:YCCCCCCCCCCC----
ATCCCCGCCCCTAAAA

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-YCCCCCCCCCCC-
NAGCCCCGCCCCCN