Information for motif53


Reverse Opposite:

p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.916
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif1.80%
Average Position of motif in Targets492.4 +/- 379.2bp
Average Position of motif in Background466.3 +/- 268.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TATATACGTATA--
TGTATATATATACC

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------TATATACGTATA
ATGGGATATATCCGCCT-

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TATATACGTATA
TCTTTATATATAAATA

PB0096.1_Zfp187_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TATATACGTATA-
TTATGTACTAATAA

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------TATATACGTATA
NNNNNNCTTTTATAN-----

MA0108.2_TBP/Jaspar

Match Rank:6
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------TATATACGTATA
NNNNNNCTTTTATAN-----

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TATATACGTATA-----
AAAATATGCATAATAAA

MA0033.1_FOXL1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TATATACGTATA
TATACATA------

MA0124.1_NKX3-1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TATATACGTATA
---ATACTTA--

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TATATACGTATA
NNNTTTGTTTACTTTTN