Information for motif54


Reverse Opposite:

p-value:1e-10
log p-value:-2.392e+01
Information Content per bp:1.949
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets305.3 +/- 173.0bp
Average Position of motif in Background157.8 +/- 147.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.91
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TTCCATTCCA--
--GCATTCCAGN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTCCATTCCA--
--RCATTCCWGG

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTCCATTCCA
ATTTTCCATT---

MA0090.1_TEAD1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTCCATTCCA---
-CACATTCCTCCG

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATTCCA-----
NNNTCCATCCCATAANN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATTCCA
GTTTCACTTCCG

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTCCATTCCA
CAGTTTCGNTTCTN

MA0152.1_NFATC2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTCCATTCCA
TTTTCCA-----

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTCCATTCCA----
--SSAATCCACANN

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTCCATTCCA
TNGAATTTCATTNAN