Information for motif55


Reverse Opposite:

p-value:1e-9
log p-value:-2.099e+01
Information Content per bp:1.979
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets401.2 +/- 402.7bp
Average Position of motif in Background381.4 +/- 215.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0502.1_NFYB/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GACCAAGC--
AAATGGACCAATCAG

MA0060.2_NFYA/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GACCAAGC--------
TGGACCAATCAGCACTCT

MA0164.1_Nr2e3/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GACCAAGC--
---CAAGCTT

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GACCAAGC-
ACTAGCCAATCA

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GACCAAGC---
GGACCACCCACG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GACCAAGC-
---CACGCA

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACCAAGC--
AGCCAATCGG

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GACCAAGC--
ATGACTCAGCAD

MA0150.2_Nfe2l2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GACCAAGC-
CAGCATGACTCAGCA

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GACCAAGC-
GATGACTCAGCA