Information for motif56


Reverse Opposite:

p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.530
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets417.0 +/- 281.4bp
Average Position of motif in Background497.9 +/- 180.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGCTCCAT
-GCTCCG-

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGCTCCAT----
AGCTCGGCGCCAAAAGC

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCTCCAT
NGCTN---

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGCTCCAT----
CCTTCGGCGCCAAAAGG

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGCTCCAT----
TACGAGACTCCTCTAAC

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCTCCAT--
DGATCRATAN

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCTCCAT
--ATCCAC

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTCCAT
GGCGCGCT

MA0095.2_YY1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTCCAT----
GCNGCCATCTTG

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GGCTCCAT---
CTCCAGGGGTCAATTGA