Information for motif9


Reverse Opposite:

p-value:1e-35
log p-value:-8.195e+01
Information Content per bp:1.920
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif4.89%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets447.3 +/- 329.0bp
Average Position of motif in Background526.7 +/- 385.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GAGGATAG
GTGGAT--

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAGGATAG-
NNTGTGGATTSS

MA0479.1_FOXH1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGGATAG--
TGTGGATTNNN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGGATAG
TGGGGA---

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGGATAG---
AAGGATATNTN

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGGATAG
AGAGGAA--

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATAG--
CNGAGGAATGTG

MA0136.1_ELF5/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGGATAG-
AAGGAAGTA

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATAG
CTGTGGTTTN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAGGATAG
NNTGTGGTTT-