Information for motif11


Reverse Opposite:

p-value:1e-12
log p-value:-2.917e+01
Information Content per bp:1.937
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets377.1 +/- 289.9bp
Average Position of motif in Background537.3 +/- 401.2bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATACTATTC---
NAGATWNBNATCTNN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GATACTATTC----
----CTATTTTTGG

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GATACTATTC------
NDBAGATRWTATCTVNNNNN

PB0125.1_Gata3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GATACTATTC------
NNNNNCGATANNATCTNNNNAN

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GATACTATTC----
TNCNNAACAATTTTTNC

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GATACTATTC-
NNCNNAACAATTNT

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GATACTATTC-------
GACCACATTCATACAAT

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GATACTATTC-
GATAACATCCTAGTAG

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GATACTATTC-
CTGATCGAAACCAAAGT

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GATACTATTC--
CNNNGCTACTGTANNN