p-value: | 1e-12 |
log p-value: | -2.871e+01 |
Information Content per bp: | 1.585 |
Number of Target Sequences with motif | 21.0 |
Percentage of Target Sequences with motif | 0.84% |
Number of Background Sequences with motif | 4.9 |
Percentage of Background Sequences with motif | 0.12% |
Average Position of motif in Targets | 356.9 +/- 308.9bp |
Average Position of motif in Background | 453.3 +/- 310.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PH0175.1_Vax2/Jaspar
Match Rank: | 1 |
Score: | 0.76 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGGCCCTAATTA------ --GNCTTAATTAGTGNNN |
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PH0039.1_Mnx1/Jaspar
Match Rank: | 2 |
Score: | 0.76 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCCCTAATTA---- NNNCACTAATTANTNN |
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PB0031.1_Hoxa3_1/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGCCCTAATTA-- TGGAGGTAATTAAC |
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Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
Match Rank: | 4 |
Score: | 0.74 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TGGCCCTAATTA ----NCTAATTA |
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PH0062.1_Hoxb7/Jaspar
Match Rank: | 5 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCCCTAATTA---- TNNCATTAATTANTNC |
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PH0050.1_Hoxa3/Jaspar
Match Rank: | 6 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGCCCTAATTA-- TTGAGGTAATTAGT |
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PH0160.1_Shox2/Jaspar
Match Rank: | 7 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGGCCCTAATTA------ -CGCGTTAATTAATTGTG |
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PH0055.1_Hoxa7_2/Jaspar
Match Rank: | 8 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCCCTAATTA---- TNCCATTAATTACTNC |
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PH0028.1_En1/Jaspar
Match Rank: | 9 |
Score: | 0.73 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGGCCCTAATTA------ --GNATTAATTAGTTNNC |
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PH0159.1_Rhox6/Jaspar
Match Rank: | 10 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGGCCCTAATTA------ -TGCCTTAATTAATGCTC |
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