Information for motif14


Reverse Opposite:

p-value:1e-12
log p-value:-2.789e+01
Information Content per bp:1.948
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets285.1 +/- 279.3bp
Average Position of motif in Background444.3 +/- 408.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGCTTAGGCA
GGATTAGC--

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTAGGCA
NGGGATTA----

MA0467.1_Crx/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGCTTAGGCA
AAGAGGATTAG---

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GGCTTAGGCA-
TGAACCGGATTAATGAA

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGCTTAGGCA
TTGCCCGGATTAGG--

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGCTTAGGCA--
ATTGCCTCAGGCAAT

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCTTAGGCA
TGCTGAGTCA

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCTTAGGCA-
HTGCTGAGTCAT

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCTTAGGCA--
TGCTGAGTCATC

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GGCTTAGGCA
CGTTGGGGATTAGCCT