Information for motif15


Reverse Opposite:

p-value:1e-11
log p-value:-2.760e+01
Information Content per bp:1.933
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets443.5 +/- 353.0bp
Average Position of motif in Background705.0 +/- 448.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0030.1_FOXF2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGATACACA--
CAAACGTAAACAAT

PB0017.1_Foxj3_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGATACACA-----
AAAAAGTAAACAAACAC

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAGATACACA
-AAATAAACA

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGATACACA-----
AAAATGTAAACAAACAG

MA0481.1_FOXP1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGATACACA---
CAAAAGTAAACAAAG

PB0019.1_Foxl1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGATACACA-----
TAAATGTAAACAAAGGT

MA0479.1_FOXH1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGATACACA
TCCAATCCACA

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGATACACA------
AAAGTAAACAAAAATT

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGATACACA--
SSAATCCACANN

MA0032.1_FOXC1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAGATACACA--
----TACTNNNN