Information for motif16


Reverse Opposite:

p-value:1e-11
log p-value:-2.701e+01
Information Content per bp:1.505
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets413.5 +/- 436.2bp
Average Position of motif in Background490.5 +/- 365.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0014.1_Esrra_1/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CACCTTGATGCT
NNNNATGACCTTGANTN-

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACCTTGATGCT
NTGACCTTGA----

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACCTTGATGCT
TGACCTTGAV---

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACCTTGATGCT
TGACACCT-------

MA0071.1_RORA_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CACCTTGATGCT
TGACCTTGAT---

MA0141.2_Esrrb/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CACCTTGATGCT
TGACCTTGANNN-

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACCTTGATGCT
TGACCTTGAN---

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CACCTTGATGCT
NGTGACCTTGG----

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACCTTGATGCT
NNCACCTGNN----

MA0523.1_TCF7L2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CACCTTGATGCT-
TNCCTTTGATCTTN