Information for motif18


Reverse Opposite:

p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.955
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets436.9 +/- 264.6bp
Average Position of motif in Background128.8 +/- 97.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0161.1_NFIC/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGGCGCA
TTGGCA--

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCGCA-----
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCGCA-----
NNNNTTGGCGCCGANNN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTGGCGCA
GGTCTGGCAT-

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTGGCGCA------
TCTTTGGCGTACCCTAA

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTGGCGCA--
--GGCGCGCT

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCGCA-----
NAGANTGGCGGGGNGNA

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCGCA-
GCGCATGCGCAG

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCGCA---
TGCCCTGGGGCNANN

MA0024.2_E2F1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCGCA--
CCTCCCGCCCN