p-value: | 1e-11 |
log p-value: | -2.656e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 0.80% |
Number of Background Sequences with motif | 4.1 |
Percentage of Background Sequences with motif | 0.10% |
Average Position of motif in Targets | 344.6 +/- 280.3bp |
Average Position of motif in Background | 543.1 +/- 161.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PH0112.1_Nkx2-3/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AGTACTTATTGA CTTTAAGTACTTAATG- |
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MA0124.1_NKX3-1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGTACTTATTGA -ATACTTA---- |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------AGTACTTATTGA NATTTAAGTACTTANNA- |
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PB0197.1_Zfp105_2/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGTACTTATTGA----- NAAANTTATTGAANCAN |
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PH0062.1_Hoxb7/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTACTTATTGA-- GTAGTAATTAATGCAA |
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PH0039.1_Mnx1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTACTTATTGA-- GTACTAATTAGTGGCG |
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PB0188.1_Tcf7l2_2/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGTACTTATTGA----- -NNANTGATTGATNNNN |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTACTTATTGA AAGCACTTAA--- |
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PH0008.1_Barx2/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTACTTATTGA-- TAAGTAATTAGTTATA |
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PH0055.1_Hoxa7_2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTACTTATTGA-- GTAGTAATTAATGGAA |
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