Information for motif2


Reverse Opposite:

p-value:1e-19
log p-value:-4.562e+01
Information Content per bp:1.509
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets374.9 +/- 292.6bp
Average Position of motif in Background790.6 +/- 287.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0463.1_Bcl6/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACTGCCTAGAGA---
-TTTCCTAGAAAGCA

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACTGCCTAGAGA----
-TTTCCTGGAAAGNNN

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCCTAGAGA--
NNNATTCCTCGAAAGN

MA0100.2_Myb/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACTGCCTAGAGA
CCAACTGCCA-----

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACTGCCTAGAGA--
--TCCCNNGGGACN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTGCCTAGAGA
ATTTCCAAGAA-

MA0137.3_STAT1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACTGCCTAGAGA
-TTTCCTGGAAA

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ACTGCCTAGAGA
CGACCAACTGCCATGC--

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACTGCCTAGAGA
-TTGCCAAG---

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACTGCCTAGAGA
-CTGCCCGCA--