Information for motif20


Reverse Opposite:

p-value:1e-11
log p-value:-2.630e+01
Information Content per bp:1.701
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets392.8 +/- 290.4bp
Average Position of motif in Background960.4 +/- 52.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----ACTGTGTAAGAA
NNNCCATTGTGTNAN--

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACTGTGTAAGAA--
NNNVCTGWGYAAACASN

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACTGTGTAAGAA----
TCTTTCGAGGAATTTG

MA0047.2_Foxa2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTGTGTAAGAA
NCTAAGTAAACA

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTGTGTAAGAA
GCTGTG------

MA0463.1_Bcl6/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACTGTGTAAGAA-
NGCTTTCTAGGAAN

MA0043.1_HLF/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACTGTGTAAGAA
NATTACGTAACC-

MA0148.3_FOXA1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACTGTGTAAGAA----
-CAAAGTAAACANNNN

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACTGTGTAAGAA--
--TATGTAAACANG

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACTGTGTAAGAA
ATTGCGCAAC--