Information for motif21


Reverse Opposite:

p-value:1e-10
log p-value:-2.519e+01
Information Content per bp:1.890
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets426.9 +/- 310.3bp
Average Position of motif in Background728.6 +/- 421.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATCGGKCR-----
NNNNTTGGGCACNNCN

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATCGGKCR
NTATYGATCH

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATCGGKCR
CCGATTGGCT-

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATCGGKCR-
TNNGGGCAG

MA0502.1_NFYB/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATCGGKCR----
CTGATTGGTCNATTT

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATCGGKCR-
GGTCTGGCAT

PB0143.1_Klf7_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATCGGKCR-------
NNNTNGGGCGTATNNTN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATCGGKCR
YAACBGCC-

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATCGGKCR----
TCTCAAAGGTCACGAG

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATCGGKCR
NHAACBGYYV