| p-value: | 1e-9 |
| log p-value: | -2.091e+01 |
| Information Content per bp: | 1.981 |
| Number of Target Sequences with motif | 13.0 |
| Percentage of Target Sequences with motif | 0.52% |
| Number of Background Sequences with motif | 3.0 |
| Percentage of Background Sequences with motif | 0.07% |
| Average Position of motif in Targets | 331.6 +/- 283.5bp |
| Average Position of motif in Background | 282.8 +/- 192.8bp |
| Strand Bias (log2 ratio + to - strand density) | -0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0503.1_Nkx2-5_(var.2)/Jaspar
| Match Rank: | 1 |
| Score: | 0.74
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTGAGTGCAG
CTTGAGTGGCT |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 2 |
| Score: | 0.72
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTGAGTGCAG
TTGAGTGSTT |
|
|
|
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
| Match Rank: | 3 |
| Score: | 0.72
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTGAGTGCAG
CTYRAGTGSY- |
|
|
|
MA0122.1_Nkx3-2/Jaspar
| Match Rank: | 4 |
| Score: | 0.70
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TTGAGTGCAG
TTAAGTGGA- |
|
|
|
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 5 |
| Score: | 0.65
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTGAGTGCAG
TTAAGTGCTT |
|
|
|
PB0208.1_Zscan4_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.64
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TTGAGTGCAG--
NNNNTTGTGTGCTTNN |
|
|
|
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer
| Match Rank: | 7 |
| Score: | 0.62
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---TTGAGTGCAG--
CCATTGTATGCAAAT |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
| Match Rank: | 8 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTGAGTGCAG
TTGCGTGCVA |
|
|
|
PB0104.1_Zscan4_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.62
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TTGAGTGCAG-----
NTNTATGTGCACATNNN |
|
|
|
PB0091.1_Zbtb3_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTGAGTGCAG-------
NNNANTGCAGTGCNNTT |
|
|
|
