p-value: | 1e-9 |
log p-value: | -2.091e+01 |
Information Content per bp: | 1.981 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 0.52% |
Number of Background Sequences with motif | 3.0 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 331.6 +/- 283.5bp |
Average Position of motif in Background | 282.8 +/- 192.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
MA0503.1_Nkx2-5_(var.2)/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTGAGTGCAG CTTGAGTGGCT |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTGAGTGCAG TTGAGTGSTT |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTGAGTGCAG CTYRAGTGSY- |
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MA0122.1_Nkx3-2/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTGAGTGCAG TTAAGTGGA- |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTGAGTGCAG TTAAGTGCTT |
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PB0208.1_Zscan4_2/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTGAGTGCAG-- NNNNTTGTGTGCTTNN |
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Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTGAGTGCAG-- CCATTGTATGCAAAT |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTGAGTGCAG TTGCGTGCVA |
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PB0104.1_Zscan4_1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTGAGTGCAG----- NTNTATGTGCACATNNN |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTGAGTGCAG------- NNNANTGCAGTGCNNTT |
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