Information for motif27


Reverse Opposite:

p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets448.3 +/- 306.0bp
Average Position of motif in Background708.2 +/- 433.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAACTGAGAG-
GAAAGTGAAAGT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAACTGAGAG-
GAAASYGAAASY

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAACTGAGAG-
GAAACTGAAACT

MA0050.2_IRF1/Jaspar

Match Rank:4
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AAACTGAGAG-----
AAANNGAAAGTGAAAGTAAAN

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAACTGAGAG----
GNNACCGAGAATNNN

MA0508.1_PRDM1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAACTGAGAG---
AGAAAGTGAAAGTGA

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAACTGAGAG----
NNNACCGAGAGTNNN

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAACTGAGAG-
GAAAGTGAAAGT

MA0498.1_Meis1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAACTGAGAG--
NNNTGAGTGACAGCT

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAACTGAGAG
-AACCGANA-