Information for motif31


Reverse Opposite:

p-value:1e-8
log p-value:-1.848e+01
Information Content per bp:1.982
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets389.8 +/- 276.5bp
Average Position of motif in Background455.1 +/- 309.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0160.1_NR4A2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTAAAGTCAC
--AAGGTCAC

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTAAAGTCAC
TCAAGGTCAN

MA0067.1_Pax2/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTAAAGTCAC--
----AGTCACGC

MA0592.1_ESRRA/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTAAAGTCAC-
CCAAGGTCACA

MA0141.2_Esrrb/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTAAAGTCAC
AGCTCAAGGTCA-

MA0071.1_RORA_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAAAGTCAC
ATCAAGGTCA-

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTAAAGTCAC----
TATTCAAGGTCATGCGA

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTAAAGTCAC---
TCTCAAAGGTCACCTG

MA0151.1_ARID3A/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTAAAGTCAC
ATTAAA-----

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTAAAGTCAC
BTCAAGGTCA-