Information for motif32


Reverse Opposite:

p-value:1e-7
log p-value:-1.824e+01
Information Content per bp:1.878
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets1076.0 +/- 446.4bp
Average Position of motif in Background489.6 +/- 337.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTTATAT-----
ANNNGGATATATCCNNN

MA0108.2_TBP/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACGTTTATAT--
NNNNNNCTTTTATAN

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACGTTTATAT--
NNNNNNCTTTTATAN

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACGTTTATAT-----
NANTTATATATAANGN

MA0040.1_Foxq1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACGTTTATAT
TATTGTTTATT-

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACGTTTATAT---
-----TATGTNTA

PB0019.1_Foxl1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ACGTTTATAT---
NNNTTTGTTTACATTTN

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACGTTTATAT
-TGTTTATTT

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ACGTTTATAT---
NNNTTTGTTTACATTTN

MA0042.1_FOXI1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACGTTTATAT
GGATGTTTGTTT