Information for motif35


Reverse Opposite:

p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.854
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets389.7 +/- 257.4bp
Average Position of motif in Background286.2 +/- 126.3bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)2.42
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CWTCTCATYTCA
NNNTCCATCCCATAANN

MA0037.2_GATA3/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CWTCTCATYTCA
--TCTTATCT--

MA0482.1_Gata4/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CWTCTCATYTCA-
--TCTTATCTCCC

MA0036.2_GATA2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CWTCTCATYTCA
AGATTCTTATCTGT

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CWTCTCATYTCA-----
NNTNANTTCTTATCTCTANANN

MA0035.3_Gata1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CWTCTCATYTCA
-TTCTTATCTGT

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CWTCTCATYTCA
-NNCTTATCTN-

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CWTCTCATYTCA-----
--TNGAATTTCATTNAN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CWTCTCATYTCA
-NCCTTATCTG-

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CWTCTCATYTCA-
-GTTTCACTTCCG